MOMD:
Mouse Oral Microbiome Database
Home
Taxonomy
Genomics
Tools
16S rRNA Gene Idnetification
BLAST Search Genomes
Download
Publication
MOMD Genome Explorer
Selected genome:
Ligilactobacillus murinus
19428wF2_HT12
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
Genome Viewer
PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
Quick search
:
Match all words
Match any words
Match exact phrase
Partially
In whole field
(leave empty to show all)
NCBI Genome Annotation:
contigs: 193
bases: 2,276,358 bps
CDS: 2,366
rRNA: 18
tRNA: 60
tmRNA: 1
Total number of protein coding genes annotated/found:
2,282
Display
20
50
100
All items per page
Items 1 - 20
🡆
click arrow to navigate by page or
of 115 pages
Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range
Gene Product Name
SEQF5023|JADGME010000002.1
MBF0757231.1
Genome Viewer
NA
AA
462/154
1-464
IS30 family transposase
SEQF5023|JADGME010000008.1
MBF0757702.1
Genome Viewer
NA
AA
228/76
1-230
IS200/IS605 family transposase
SEQF5023|JADGME010000009.1
MBF0757756.1
Genome Viewer
NA
AA
243/81
1-243
IS3 family transposase
SEQF5023|JADGME010000010.1
MBF0757806.1
Genome Viewer
NA
AA
66/22
1-68
transposase
SEQF5023|JADGME010000012.1
MBF0757887.1
Genome Viewer
NA
AA
228/76
1-230
IS30 family transposase
SEQF5023|JADGME010000014.1
MBF0757984.1
Genome Viewer
NA
AA
141/47
1-143
transposase
SEQF5023|JADGME010000023.1
MBF0758402.1
Genome Viewer
NA
AA
66/22
1-68
transposase
SEQF5023|JADGME010000032.1
MBF0758676.1
Genome Viewer
NA
AA
228/76
1-230
IS200/IS605 family transposase
SEQF5023|JADGME010000033.1
MBF0758698.1
Genome Viewer
NA
AA
243/81
1-243
IS3 family transposase
SEQF5023|JADGME010000035.1
MBF0758747.1
Genome Viewer
NA
AA
228/76
1-230
IS200/IS605 family transposase
SEQF5023|JADGME010000036.1
MBF0758768.1
Genome Viewer
NA
AA
84/28
1-85
IS3 family transposase
SEQF5023|JADGME010000037.1
MBF0758788.1
Genome Viewer
NA
AA
93/31
1-95
IS3 family transposase
SEQF5023|JADGME010000038.1
MBF0758806.1
Genome Viewer
NA
AA
66/22
1-68
transposase
SEQF5023|JADGME010000039.1
MBF0758816.1
Genome Viewer
NA
AA
228/76
1-230
IS200/IS605 family transposase
SEQF5023|JADGME010000043.1
MBF0758882.1
Genome Viewer
NA
AA
84/28
1-85
IS3 family transposase
SEQF5023|JADGME010000045.1
MBF0758914.1
Genome Viewer
NA
AA
66/22
1-68
transposase
SEQF5023|JADGME010000047.1
MBF0758941.1
Genome Viewer
NA
AA
243/81
1-243
IS3 family transposase
SEQF5023|JADGME010000051.1
MBF0758995.1
Genome Viewer
NA
AA
435/145
1-436
IS30 family transposase
SEQF5023|JADGME010000052.1
MBF0759010.1
Genome Viewer
NA
AA
66/22
1-68
transposase
SEQF5023|JADGME010000055.1
MBF0759051.1
Genome Viewer
NA
AA
129/43
1-131
IS3 family transposase
Items 1 - 20
🡆
click arrow to navigate by page or
of 115 pages
Genome Viewer
JBrowse Genome Viewer
* Click GI,UID,Gene Product to go to NCBI record
^ Click column names to toggle sorting
Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
Powered by
